PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0069ss00980.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 145aa    MW: 15862 Da    PI: 7.974
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0069ss00980.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.15.7e-1028552855
                AP2 28 rkrfslgkfgtaeeAakaaiaarkkleg 55
                       ++r++lg+f taeeAa+a+++a+  + g
  Vang0069ss00980.1 28 KRRVWLGTFETAEEAARAYDEAAILMSG 55
                       59********************987765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103213.261163IPR001471AP2/ERF domain
SMARTSM003807.2E-151669IPR001471AP2/ERF domain
SuperFamilySSF541712.68E-122664IPR016177DNA-binding domain
CDDcd000181.36E-192764No hitNo description
Gene3DG3DSA:3.30.730.102.3E-182863IPR001471AP2/ERF domain
PfamPF008473.5E-62853IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MPFTCTVHLS NKSGEKHLKV QSDLIVLKRR VWLGTFETAE EAARAYDEAA ILMSGRNAKT  60
NFPVGENQVL NHSTSSSSSS TSTLSAVLSA KLRKCCKSPS PSLTCLRLDT ENSHIGKIKP  120
EEGNGLDEEQ RMALQMIEEL LNRN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150421e-148AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007135744.12e-62hypothetical protein PHAVU_010G154900g
SwissprotQ9XI334e-39WIN1_ARATH; Ethylene-responsive transcription factor WIN1
TrEMBLV7AT162e-62V7AT16_PHAVU; Uncharacterized protein
STRINGGLYMA07G03500.12e-58(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF4067722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.17e-27ERF family protein